Radiens
Contents:
Introduction
Examples
Accessing clients in MATLAB
Clients API
SubClients API
Enums
Other data structures, functions, and types
Radiens
Index
Index
A
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B
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C
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D
|
E
|
F
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G
|
H
|
I
|
K
|
L
|
M
|
N
|
O
|
P
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R
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S
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T
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U
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V
|
W
|
X
A
A (radiens.utils.enums.Port attribute)
ABSOLUTE (radiens.utils.enums.PsdScaling attribute)
AIN (radiens.utils.enums.SignalType attribute)
ALLEGO (radiens.utils.enums.ClientType attribute)
AllegoClient (class in radiens)
AllegoState (class in radiens.lib.allego_lib)
amp (radiens.utils.constants.SignalArrays attribute)
AMP (radiens.utils.enums.SignalType attribute)
attributes (radiens.lib.channel_metadata.ChannelMetadata property)
(radiens.lib.dataset_metadata.DatasetMetadata property)
(radiens.lib.signals_snapshot.Signals property)
AVG (radiens.utils.enums.MetricMode attribute)
B
B (radiens.utils.enums.Port attribute)
BASE (radiens.utils.enums.MetricMode attribute)
base_name (radiens.lib.allego_lib.AllegoState property)
(radiens.lib.dataset_metadata.DatasetMetadata property)
BINARY (radiens.utils.enums.SignalUnits attribute)
C
C (radiens.utils.enums.Port attribute)
cable_length_ft (radiens.lib.allego_lib.AllegoState property)
calculate() (radiens.metrics_client.MetricsClient method)
channel_metadata (radiens.lib.dataset_metadata.DatasetMetadata property)
(radiens.lib.signals_snapshot.Signals property)
ChannelMetadata (class in radiens.lib.channel_metadata)
clear() (radiens.metrics_client.MetricsClient method)
clear_dataset() (radiens.VidereClient method)
clear_dataset_id() (radiens.lib.dataset_metadata.DatasetMetadata method)
clear_spikes() (radiens.spike_sorter_client.SpikeSorterClient method)
ClientType (class in radiens.utils.enums)
concat() (radiens.lib.signals_snapshot.Signals method)
connected (radiens.lib.allego_lib.AllegoState property)
convert_kilosort_output() (radiens.spikes_client.SpikesClient method)
CSV (radiens.utils.enums.RadiensFileType attribute)
CURATE (radiens.utils.enums.ClientType attribute)
CurateClient (class in radiens)
D
D (radiens.utils.enums.Port attribute)
dashboard() (radiens.VidereClient method)
DATA (radiens.utils.enums.KeyIndex attribute)
DatasetMetadata (class in radiens.lib.dataset_metadata)
DIN (radiens.utils.enums.SignalType attribute)
DOUT (radiens.utils.enums.SignalType attribute)
dsp_band_pass_filter() (radiens.CurateClient method)
dsp_band_stop_filter() (radiens.CurateClient method)
dsp_car() (radiens.CurateClient method)
dsp_clean_up() (radiens.CurateClient method)
dsp_high_pass_filter() (radiens.CurateClient method)
dsp_low_pass_filter() (radiens.CurateClient method)
dsp_notch_filter() (radiens.CurateClient method)
dsp_paired_diff() (radiens.CurateClient method)
dsp_progress() (radiens.CurateClient method)
dsp_slice_channels() (radiens.CurateClient method)
dsp_slice_time() (radiens.CurateClient method)
dsp_stream (radiens.CurateClient property)
dsp_time_decimate() (radiens.CurateClient method)
dsp_virtual_ref() (radiens.CurateClient method)
dur_sec (radiens.utils.constants.TimeRange attribute)
DUR_SEC (radiens.utils.enums.MetricName attribute)
E
E (radiens.utils.enums.Port attribute)
EVENT_MAX (radiens.utils.enums.MetricName attribute)
EVENT_MAX_ABS (radiens.utils.enums.MetricName attribute)
EVENT_MAX_MIN_DIFF_ABS (radiens.utils.enums.MetricName attribute)
EVENT_MEAN_MAX_MIN_DIFF_ABS (radiens.utils.enums.MetricName attribute)
EVENT_MIN (radiens.utils.enums.MetricName attribute)
EVENT_RATE (radiens.utils.enums.MetricName attribute)
EVENT_TIMESTAMP_MAX (radiens.utils.enums.MetricName attribute)
EVENT_TIMESTAMP_MAX_ABS (radiens.utils.enums.MetricName attribute)
EVENT_TIMESTAMP_MAX_MIN_DIFF_ABS (radiens.utils.enums.MetricName attribute)
EVENT_TIMESTAMP_MIN (radiens.utils.enums.MetricName attribute)
F
F (radiens.utils.enums.Port attribute)
FftWindow (class in radiens.utils.enums)
file_convert() (radiens.CurateClient method)
file_type (radiens.lib.dataset_metadata.DatasetMetadata property)
FROM_HEAD (radiens.utils.enums.TrsMode attribute)
fs (radiens.utils.constants.TimeRange attribute)
G
G (radiens.utils.enums.Port attribute)
get_analog_out_settings() (radiens.AllegoClient method)
get_available_sensors() (radiens.AllegoClient method)
get_channel_metadata() (radiens.AllegoClient method)
get_dashboard() (radiens.spike_sorter_client.SpikeSorterClient method)
get_data_file_metadata() (radiens.VidereClient method)
get_dataset_ids() (radiens.VidereClient method)
get_digital_out_states() (radiens.AllegoClient method)
get_metrics() (radiens.metrics_client.MetricsClient method)
get_metrics_status() (radiens.metrics_client.MetricsClient method)
get_neurons() (radiens.spikes_client.SpikesClient method)
get_params() (radiens.metrics_client.MetricsClient method)
(radiens.spike_sorter_client.SpikeSorterClient method)
get_psd() (radiens.signals_client.SignalsClient method)
get_recent_spikes() (radiens.spikes_client.SpikesClient method)
get_signals() (radiens.AllegoClient method)
(radiens.signals_client.SignalsClient method)
get_spike_rasters() (radiens.spikes_client.SpikesClient method)
get_spike_timestamps() (radiens.spikes_client.SpikesClient method)
get_spike_waveforms() (radiens.spikes_client.SpikesClient method)
get_spikes_metadata() (radiens.spikes_client.SpikesClient method)
get_state() (radiens.spike_sorter_client.SpikeSorterClient method)
get_status() (radiens.AllegoClient method)
get_stim_params() (radiens.AllegoClient method)
get_stream_loop_dur_ms() (radiens.AllegoClient method)
gpio_ain (radiens.utils.constants.SignalArrays attribute)
gpio_din (radiens.utils.constants.SignalArrays attribute)
gpio_dout (radiens.utils.constants.SignalArrays attribute)
H
H (radiens.utils.enums.Port attribute)
HAMMING_p01 (radiens.utils.enums.FftWindow attribute)
HAMMING_p05 (radiens.utils.enums.FftWindow attribute)
HDF5 (radiens.utils.enums.RadiensFileType attribute)
hub (radiens.VidereClient property)
hubs (radiens.CurateClient property)
(radiens.VidereClient property)
(radiens.workspace_client.WorkspaceClient property)
I
id (radiens.CurateClient property)
(radiens.lib.dataset_metadata.DatasetMetadata property)
(radiens.VidereClient property)
(radiens.workspace_client.WorkspaceClient property)
index() (radiens.lib.channel_metadata.ChannelMetadata method)
initialize() (radiens.spike_sorter_client.SpikeSorterClient method)
INTAN_RECORDING_CONTROLLER_1024 (radiens.utils.enums.SystemMode attribute)
INTAN_RECORDING_CONTROLLER_512 (radiens.utils.enums.SystemMode attribute)
INTAN_USB2 (radiens.utils.enums.SystemMode attribute)
K
KeyIdxs (class in radiens.utils.constants)
KeyIndex (class in radiens.utils.enums)
KILOSORT2 (radiens.utils.enums.RadiensFileType attribute)
L
link_data_file() (radiens.VidereClient method)
M
make_time_range() (in module radiens.utils.util)
MAX (radiens.utils.enums.MetricName attribute)
MAX_ABS (radiens.utils.enums.MetricName attribute)
MAX_ABS_ISI (radiens.utils.enums.MetricName attribute)
MAX_ISI (radiens.utils.enums.MetricName attribute)
MAX_MIN_DIFF_ABS (radiens.utils.enums.MetricName attribute)
MAX_MIN_DIFF_ABS_AMPLIFIED (radiens.utils.enums.MetricName attribute)
MAX_MIN_DIFF_ABS_ISI (radiens.utils.enums.MetricName attribute)
MEAN (radiens.utils.enums.MetricName attribute)
MEAN_MAX (radiens.utils.enums.MetricName attribute)
MEAN_MAX_ABS (radiens.utils.enums.MetricName attribute)
MEAN_MIN (radiens.utils.enums.MetricName attribute)
metric_ids (radiens.lib.sig_metrics.SignalMetrics property)
MetricMode (class in radiens.utils.enums)
MetricName (class in radiens.utils.enums)
MetricsClient (class in radiens.metrics_client)
MICROVOLTS (radiens.utils.enums.SignalUnits attribute)
MIN (radiens.utils.enums.MetricName attribute)
MIN_ISI (radiens.utils.enums.MetricName attribute)
N
N (radiens.utils.constants.TimeRange attribute)
NEX5 (radiens.utils.enums.RadiensFileType attribute)
NOISE_UV (radiens.utils.enums.MetricName attribute)
NSX (radiens.utils.enums.RadiensFileType attribute)
NTV (radiens.utils.enums.KeyIndex attribute)
ntv_idxs (radiens.lib.sig_metrics.SignalMetrics property)
NUM_EVENTS (radiens.utils.enums.MetricName attribute)
num_packets (radiens.lib.sig_metrics.SignalMetrics property)
NUM_PTS (radiens.utils.enums.MetricName attribute)
NUM_PTS_ISI (radiens.utils.enums.MetricName attribute)
num_selected_sigs_total (radiens.lib.channel_metadata.ChannelMetadata property)
num_sigs (radiens.lib.sig_metrics.SignalMetrics property)
num_sigs() (radiens.lib.channel_metadata.ChannelMetadata method)
num_sigs_total() (radiens.lib.channel_metadata.ChannelMetadata method)
NWB (radiens.utils.enums.RadiensFileType attribute)
O
OPEN_EPHYS_USB2 (radiens.utils.enums.SystemMode attribute)
OPEN_EPHYS_USB3 (radiens.utils.enums.SystemMode attribute)
P
packet_dur_sec (radiens.lib.sig_metrics.SignalMetrics property)
packet_idxs (radiens.lib.sig_metrics.SignalMetrics property)
packet_stats (radiens.lib.sig_metrics.SignalMetrics property)
PASS_THROUGH (radiens.utils.enums.FftWindow attribute)
path (radiens.lib.dataset_metadata.DatasetMetadata property)
Port (class in radiens.utils.enums)
port_num_channels (radiens.lib.allego_lib.AllegoState property)
print() (radiens.lib.sig_metrics.SignalMetrics method)
progress_bar() (radiens.CurateClient method)
PsdScaling (class in radiens.utils.enums)
R
RadiensFileType (class in radiens.utils.enums)
rebase() (radiens.spike_sorter_client.SpikeSorterClient method)
recording (radiens.lib.allego_lib.AllegoState property)
restart() (radiens.AllegoClient method)
RHD (radiens.utils.enums.RadiensFileType attribute)
RMS (radiens.utils.enums.MetricName attribute)
RMS_ISI (radiens.utils.enums.MetricName attribute)
S
sample_freq (radiens.lib.allego_lib.AllegoState property)
SD (radiens.utils.enums.MetricName attribute)
SD_ISI (radiens.utils.enums.MetricName attribute)
sec (radiens.utils.constants.TimeRange attribute)
sel_index() (radiens.lib.channel_metadata.ChannelMetadata method)
sel_num_sigs() (radiens.lib.channel_metadata.ChannelMetadata method)
sensor_spec (radiens.lib.channel_metadata.ChannelMetadata property)
set_analog_out_high_pass() (radiens.AllegoClient method)
set_digital_out_manual() (radiens.AllegoClient method)
set_event_shadow() (radiens.metrics_client.MetricsClient method)
set_event_threshold() (radiens.metrics_client.MetricsClient method)
set_event_threshold_level() (radiens.metrics_client.MetricsClient method)
set_event_window() (radiens.metrics_client.MetricsClient method)
set_manual_stim_trigger() (radiens.AllegoClient method)
set_packet_duration() (radiens.metrics_client.MetricsClient method)
set_recording() (radiens.AllegoClient method)
set_recording_config() (radiens.AllegoClient method)
set_sampling_freq() (radiens.AllegoClient method)
set_sensor() (radiens.AllegoClient method)
set_sorting() (radiens.spike_sorter_client.SpikeSorterClient method)
set_spike_shadow() (radiens.spike_sorter_client.SpikeSorterClient method)
set_spike_window() (radiens.spike_sorter_client.SpikeSorterClient method)
set_stim_params() (radiens.AllegoClient method)
set_streaming() (radiens.AllegoClient method)
set_threshold() (radiens.spike_sorter_client.SpikeSorterClient method)
set_threshold_level() (radiens.spike_sorter_client.SpikeSorterClient method)
set_time_to_cache_head() (radiens.AllegoClient method)
settings (radiens.lib.sig_metrics.SignalMetrics property)
sig_units (radiens.lib.channel_metadata.ChannelMetadata property)
signal_metrics() (radiens.AllegoClient method)
(radiens.CurateClient method)
(radiens.VidereClient method)
SignalArrays (class in radiens.utils.constants)
SignalMetrics (class in radiens.lib.sig_metrics)
Signals (class in radiens.lib.signals_snapshot)
signals (radiens.lib.signals_snapshot.Signals property)
signals() (radiens.VidereClient method)
SignalsClient (class in radiens.signals_client)
SignalType (class in radiens.utils.enums)
SignalUnits (class in radiens.utils.enums)
SMARTBOX_CLASSIC (radiens.utils.enums.SystemMode attribute)
SMARTBOX_PRO (radiens.utils.enums.SystemMode attribute)
SMARTBOX_PRO_SINAPS_1024 (radiens.utils.enums.SystemMode attribute)
SMARTBOX_PRO_SINAPS_256 (radiens.utils.enums.SystemMode attribute)
SMARTBOX_PRO_SINAPS_512 (radiens.utils.enums.SystemMode attribute)
SMARTBOX_SIM_GEN_SINE (radiens.utils.enums.SystemMode attribute)
SMARTBOX_SIM_GEN_SINE_HIGH_FREQ (radiens.utils.enums.SystemMode attribute)
SMARTBOX_SIM_GEN_SINE_MAPPED (radiens.utils.enums.SystemMode attribute)
SMARTBOX_SIM_GEN_SINE_MULTI_BAND (radiens.utils.enums.SystemMode attribute)
SMARTBOX_SIM_GEN_SPIKES (radiens.utils.enums.SystemMode attribute)
SNR (radiens.utils.enums.MetricName attribute)
spike_sorter() (radiens.AllegoClient method)
(radiens.VidereClient method)
SPIKES (radiens.utils.enums.RadiensFileType attribute)
spikes() (radiens.AllegoClient method)
(radiens.CurateClient method)
(radiens.VidereClient method)
SpikesClient (class in radiens.spikes_client)
SpikeSorterClient (class in radiens.spike_sorter_client)
stream (radiens.lib.allego_lib.AllegoState property)
STREAM (radiens.utils.enums.MetricMode attribute)
SUBSET (radiens.utils.enums.TrsMode attribute)
summa_clear_sessions() (radiens.VidereClient method)
summa_get_session_aggregate_statistics() (radiens.VidereClient method)
summa_get_session_datasource_statistics() (radiens.VidereClient method)
summa_launch_session_analysis() (radiens.VidereClient method)
summa_list_sessions() (radiens.VidereClient method)
summa_session_status() (radiens.VidereClient method)
SYS (radiens.utils.enums.KeyIndex attribute)
system_mode (radiens.lib.allego_lib.AllegoState property)
SystemMode (class in radiens.utils.enums)
T
table (radiens.lib.channel_metadata.ChannelMetadata property)
(radiens.lib.dataset_metadata.DatasetMetadata property)
TDT (radiens.utils.enums.RadiensFileType attribute)
time_range (radiens.lib.dataset_metadata.DatasetMetadata property)
(radiens.lib.sig_metrics.SignalMetrics property)
(radiens.lib.signals_snapshot.Signals property)
TimeRange (class in radiens.utils.constants)
timestamp (radiens.utils.constants.TimeRange attribute)
TIMESTAMP_MAX (radiens.utils.enums.MetricName attribute)
TIMESTAMP_MIN (radiens.utils.enums.MetricName attribute)
TO_HEAD (radiens.utils.enums.TrsMode attribute)
TR (radiens.lib.dataset_metadata.DatasetMetadata property)
(radiens.lib.sig_metrics.SignalMetrics property)
(radiens.lib.signals_snapshot.Signals property)
TrsMode (class in radiens.utils.enums)
type (radiens.AllegoClient property)
(radiens.CurateClient property)
(radiens.VidereClient property)
U
UNKNOWN (radiens.utils.enums.SignalUnits attribute)
V
val (radiens.lib.sig_metrics.SignalMetrics property)
VAR (radiens.utils.enums.MetricName attribute)
VAR_ISI (radiens.utils.enums.MetricName attribute)
VIDERE (radiens.utils.enums.ClientType attribute)
VidereClient (class in radiens)
VOLTS (radiens.utils.enums.SignalUnits attribute)
W
walltime (radiens.utils.constants.TimeRange attribute)
workspace() (radiens.AllegoClient method)
workspace_current() (radiens.workspace_client.WorkspaceClient method)
workspace_delete() (radiens.workspace_client.WorkspaceClient method)
workspace_list() (radiens.workspace_client.WorkspaceClient method)
workspace_save() (radiens.workspace_client.WorkspaceClient method)
workspace_switch() (radiens.workspace_client.WorkspaceClient method)
WorkspaceClient (class in radiens.workspace_client)
X
XDAQ_CORE_REC (radiens.utils.enums.SystemMode attribute)
XDAQ_CORE_STIM (radiens.utils.enums.SystemMode attribute)
XDAQ_ONE_REC (radiens.utils.enums.SystemMode attribute)
XDAQ_ONE_STIM (radiens.utils.enums.SystemMode attribute)
XDAT (radiens.utils.enums.RadiensFileType attribute)